Insertion junction: CLIP2.060294_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060294
Chromosome:chromosome 3
Location:6032310
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189950 HOP1,HOP HSP70-HSP90 organizing protein; (1 of 1) K09553 - stress-induced-phosphoprotein 1 (STIP1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCGCTCCAATAGATTTGTTCGCTATCACACCGGTACTGCCACGGTAG
Internal bar code:AAAGGGTCAGCCAGTCCAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1312
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAAGTAAGCATTGGGGCC
Suggested primer 2:CTTTGCTCACATACGACGCG