Insertion junction: CLIP2.060302_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060302
Chromosome:chromosome 11
Location:3112765
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475350 (1 of 1) PF05093 - Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis (CIAPIN1) 3'UTR
Cre11.g475400 (1 of 1) K11864 - BRCA1/BRCA2-containing complex subunit 3 (BRCC3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTAACAATGCGATGATCAGCAGACTGGTCACGAGTCACCAGTGCCCA
Internal bar code:ATATGTTAAGATATGGAGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:485
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CACATTCTTAGCACGCTCGC
Suggested primer 2:GGCATTCCCAACAGCTACCT