Insertion junction: CLIP2.060302_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060302
Chromosome:chromosome 11
Location:3112767
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475350 (1 of 1) PF05093 - Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis (CIAPIN1) 3'UTR
Cre11.g475400 (1 of 1) K11864 - BRCA1/BRCA2-containing complex subunit 3 (BRCC3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCACATTGTTCCCCAAACCCTGAGTTCACTTTGACAGCTGCACAGTATC
Internal bar code:ATATGTTAAGATATGGAGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4200
LEAP-Seq percent confirming:78.7879
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATTCCCAACAGCTACCT
Suggested primer 2:CACATTCTTAGCACGCTCGC