Insertion junction: CLIP2.060303_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060303
Chromosome:chromosome 4
Location:1902231
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218400 (1 of 9) IPR000210//IPR011042//IPR011333 - BTB/POZ domain // Six-bladed beta-propeller, TolB-like // POZ domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGCTCGTGATGATGGTACATGGCTAGGCTGGCGCAGCTGTGTTCGT
Internal bar code:GTGGAGATAAGAGCAAAAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1781
LEAP-Seq percent confirming:73.5294
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGATTCTCCGAGCTTCC
Suggested primer 2:GCGCGGACATTTTGCCTAAA