Insertion junction: CLIP2.060313_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060313
Chromosome:chromosome 12
Location:8307763
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551050 (1 of 1) PTHR31802//PTHR31802:SF3 - FAMILY NOT NAMED // 32 KDA HEAT SHOCK PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTCCGAAAGATTGACTCGTCTCTGTCAGGAACGGACATTGGCACATCG
Internal bar code:TAGGTTATAACCCCGTGCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1052
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGTAGAGTGTGCACGAC
Suggested primer 2:ACACACACACACACACGTCT