Insertion junction: CLIP2.060318_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060318
Chromosome:chromosome 2
Location:8242483
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g143600 FEE1 (1 of 1) PTHR12436:SF3 - GERMINAL-CENTER ASSOCIATED NUCLEAR PROTEIN; Feruloyl esterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGTGCAGGTGACGATGCTGGCGTCCCTCGCGCCCTTCAACTCCTCC
Internal bar code:AGAAAAGTTAGGGCGTCTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:48
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATGAGCCTACTCCGTCA
Suggested primer 2:TTGGCCTACTGACACGTGAC