Insertion junction: CLIP2.060325_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060325
Chromosome:chromosome 10
Location:2352741
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g434700 (1 of 11) IPR017956 - AT hook, DNA-binding motif intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGAGAAGGTGGTCTACCGCACTGGGCCGGGCCCGGCTGGGCTGGGGCG
Internal bar code:AGTAAACAAGCTTAGCGGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:170
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGTTGCTGTTGTTGCTC
Suggested primer 2:TCGTTTCCTTGCTGCGGTAT