Insertion junction: CLIP2.060327_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060327
Chromosome:chromosome 10
Location:5068091
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g455000 (1 of 1) IPR010995//IPR011009 - DNA repair Rad51/transcription factor NusA, alpha-helical // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTTTCGATGCGTTACAGGCCCAGGCGACGCGGTCTCTGGTGCCGCTTA
Internal bar code:GAGATTTGCGTATCCTTTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:254
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCAGGCCCGTAAACTTG
Suggested primer 2:CTGCTCCTTTCCGCTCTCAA