Insertion junction: CLIP2.060330_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060330
Chromosome:chromosome 13
Location:4205803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591550 SRR20 Scavenger receptor cysteine rich (SRCR) protein; (1 of 1) PTHR19331//PTHR19331:SF279 - LYSYL OXIDASE-RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTTGCGGAAGACCTAGCTATGACCAAAGTTCCATATGTCGTTATTAT
Internal bar code:TTGTGTTGTTACTAAAAAATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2902
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGCATTTGCCAGTGTCA
Suggested primer 2:TTGCACACGAACTTGGCATG