Insertion junction: CLIP2.060332_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060332
Chromosome:chromosome 3
Location:1502377
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g151550 (1 of 1) IPR000104//IPR029060 - Antifreeze protein, type I // PIN domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCCATACGCGCTGGTCCAGCGTCAGTGGTGACTTGAGCGCCTGGAAG
Internal bar code:CTATTGGGAGGTTAATTATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:295
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCAACGGATTTGTGTGCC
Suggested primer 2:CTGCTGATGGTGGTGGTGAT