Insertion junction: CLIP2.060338_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060338
Chromosome:chromosome 2
Location:8540275
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g141400 PCK1 (1 of 1) 4.1.1.49 - Phosphoenolpyruvate carboxykinase (ATP) / Phosphopyruvate carboxylase; Phosphoenolpyruvate carboxykinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACCCAAACCAAACGCTCTACCAGGTGCGCGGCCCCACTGCCCCCCGTC
Internal bar code:TACAGCGCTTGCCGATGGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2333
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAAGGAGGACGTTGAGAA
Suggested primer 2:GTTGTTCGGCCTCAGACTGA