Insertion junction: CLIP2.060344_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060344
Chromosome:chromosome 1
Location:2087797
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g011600 (1 of 1) PTHR23244//PTHR24202//PTHR24202:SF4 - KELCH REPEAT DOMAIN // FAMILY NOT NAMED // E3 UBIQUITIN-PROTEIN LIGASE MIB2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACATGCATTTGGCTGTGGGTGCGGACTCAAGTACACAGTGCCCATGAC
Internal bar code:TACGTACCGATATACCGGACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2078
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AAACATGAGAGCGGCAGTCA
Suggested primer 2:GACGAGCTGACCAACCAGAA