| Insertion cassette: | CIB2 |
| Side of cassette: | 3' |
| Strand: | + |
| Strain: | CLIP2.060345 |
| Chromosome: | chromosome 12 |
| Location: | 4461347 |
| Confidence (%): | 80 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre12.g520200 | CPL8,PPO5 | (1 of 1) PTHR13343//PTHR13343:SF16 - CREG1 PROTEIN // SUBFAMILY NOT NAMED; Conserved in the Plant Lineage | 5'UTR |
| Cre12.g520250 | PAF1 | (1 of 1) K15174 - RNA polymerase II-associated factor 1 (PAF1); RNA polymerase II-associated factor 1 | 3'UTR |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | TATAACTATGGAATTGTGCTGACGAAGCGGCTCATGACCTGCACAATGGG |
| Internal bar code: | ACTTGAGGTCCGGAAGAGTTCA |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 1549 |
| LEAP-Seq percent confirming: | 100.0 |
| LEAP-Seq n confirming: | 41 |
| LEAP-Seq n nonconfirming: | 0 |
| LEAP-Seq n unique pos: | 41 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | GTGAAGGGGGACTCTGAAGC |
| Suggested primer 2: | ACACACACACAAATGTCGCG |