Insertion junction: CLIP2.060351_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060351
Chromosome:chromosome 2
Location:4378111
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105450 CGL141 (1 of 1) PTHR36749:SF1 - F7O18.3 PROTEIN; Conserved in the Green Lineage 3'UTR
Cre02.g105500 AOD1 Acetylornithine deacetylase; (1 of 1) 3.5.1.16 - Acetylornithine deacetylase / N-acetylornithinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGAGTGTGGGACCCTCTCTGGACCTATTTAGGACTGACCCACATGACA
Internal bar code:GGGAGTTCGCTAACGGATAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1154
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGACAAGGAGCAGAACAGGT
Suggested primer 2:GAACTGGGCTCCATTGTGGA