Insertion junction: CLIP2.060355_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060355
Chromosome:plastome
Location:96711
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802305 2716992,ChreCp041,rpoB2 (1 of 2) K03043 - DNA-directed RNA polymerase subunit beta (rpoB); RNA polymerase beta subunit II CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGTGATTTATTAGCTGATAGTGCTTCAAGTATTGGAGGTGAATTAGC
Internal bar code:GCTGTTCAACAATGAGTTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:343
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACAGCAGCTCCATCTGG
Suggested primer 2:AGATGTGACGCAGCCTTGAA