Insertion junction: CLIP2.060356_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060356
Chromosome:chromosome 2
Location:1137558
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g080850 CYN47,CYN11 Cyclophilin 47; (1 of 1) IPR003582//IPR029000 - ShKT domain // Cyclophilin-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTGCGCCAAAATACAGGCGACCACACCAATGTGAGTGTCTCTTTGCA
Internal bar code:CGGGGCGATATCTAGTCGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:290
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GAACCCGCCCTCACAACATA
Suggested primer 2:GGCAGCATAACGAGCACATG