Insertion junction: CLIP2.060358_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060358
Chromosome:chromosome 7
Location:3869319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g339000 CrRbcXIIb,RBCX2B RuBisCO chaperone; (1 of 2) PTHR33791//PTHR33791:SF1 - FAMILY NOT NAMED // CHAPERONIN-LIKE RBCX PROTEIN 3'UTR
Cre07.g339050 NSG11 Cofilin/tropomyosin-type actin-binding protein; (1 of 1) K05765 - cofilin (CFL) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGGCATTCCTTCGCGCGCAACAGATCAAGGCGGGACTTGACGCGGGCT
Internal bar code:GGGGTCTAGGTTAGTGTATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1020
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCACCCAAACTGCCATTC
Suggested primer 2:ATGCACTGGCTGTCTTCTCC