Insertion junction: CLIP2.060362_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060362
Chromosome:chromosome 13
Location:5163676
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g607200 CYG42 (1 of 5) IPR000104//IPR001054//IPR029787 - Antifreeze protein, type I // Adenylyl cyclase class-3/4/guanylyl cyclase // Nucleotide cyclase; Adenylate/guanylate cyclase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAACAGACTGTGCACGCCGGTGGGCGGCGGCGTAGAAATGGTAGAAAC
Internal bar code:GAGTCACTGATCTGGGTAATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2903
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:127
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:127

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGAGAGGAAGAGATCGC
Suggested primer 2:ACTGGTATCCCGTCCCGTTA