Insertion junction: CLIP2.060372_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060372
Chromosome:chromosome 11
Location:4411275
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g483100 (1 of 1) IPR019931 - LPXTG cell wall anchor domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTGTGAACGTGCACGGCGCGTGCTGGCGAGCACCGCACGGTATGCTG
Internal bar code:AGCCGCGAGATCGAGAGGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1804
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCAAGGGAAAAGTGGGC
Suggested primer 2:GTGAGTGTGTTGGCTGCAAG