Insertion junction: CLIP2.060375_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060375
Chromosome:chromosome 12
Location:3456835
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g497350 PPR13 PentatricoPeptide Repeat protein 13 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGCGCCGCCTCCAGGCGCACCAGCGTGTCGTACTGCTCCGGGCCCAC
Internal bar code:TACCATCTCTATCTTATTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:692
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTGTGTCCAAACCTGTT
Suggested primer 2:CATCGAGGAGAACGACCTGG