Insertion junction: CLIP2.060377_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060377
Chromosome:chromosome 17
Location:4820413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802100 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCTTCCGCCGTTCCCCACACGTCACACGCCCCTTCAAGTGACCGCAT
Internal bar code:TAGTAGAGTGGAGCTTGTTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1423
LEAP-Seq percent confirming:80.8511
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGTCCAGCAAGCATCGC
Suggested primer 2:GTGGCTCTCCCTTGCTTCAT