Insertion junction: CLIP2.060382_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060382
Chromosome:chromosome 1
Location:665000
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g003751 (1 of 6) IPR000595//IPR005821//IPR018490 - Cyclic nucleotide-binding domain // Ion transport domain // Cyclic nucleotide-binding-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAGCATATATTCATGTCTCTCACCCTCTGCCCGTGCCCTCTGCCCCA
Internal bar code:CTGGATGCAATCTGGTGGCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:389
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGTGCGGAGGTTACTAG
Suggested primer 2:TCATGTTCGGTGGATGGCAA