Insertion junction: CLIP2.060384_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060384
Chromosome:chromosome 6
Location:5000684
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281600 LCI23 Low-CO2-inducible protein 23 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAACAAGCAGTTTCAACAAGCAGATGAACAGGAGCACTACATTTCGC
Internal bar code:TAGCCTTAAATATCGATGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2144
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGAACGGAACCACCTTACCA
Suggested primer 2:GTGCTGGGTTTCCGTGTTTC