Insertion junction: CLIP2.060386_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060386
Chromosome:chromosome 5
Location:3025009
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g231000 CSA5 Chlorophyceae-specific gene family A protein 3'UTR
Cre05.g800571 (1 of 1) IPR007730 - Sporulation-related domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATACTCGCACACACACGCTGCAGCACACACTATCTCTATCTTCGTTTT
Internal bar code:GATCCTGATGGTACCTCAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2046
LEAP-Seq percent confirming:57.8947
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGTCATTACTGGCGGCG
Suggested primer 2:GTGCAGTATGTCAGGCAGGT