Insertion junction: CLIP2.060386_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060386
Chromosome:chromosome 5
Location:3025014
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g231000 CSA5 Chlorophyceae-specific gene family A protein 3'UTR
Cre05.g800571 (1 of 1) IPR007730 - Sporulation-related domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGGGGAAAGGTCCTCCCCAGCCGTCCGGCCTAGGTCCGTGATGTGAG
Internal bar code:AGTTGCATACCCGCAACAAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3844
LEAP-Seq percent confirming:98.3607
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCAGTATGTCAGGCAGGT
Suggested primer 2:CAATGTCATTACTGGCGGCG