Insertion junction: CLIP2.060390_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060390
Chromosome:chromosome 6
Location:7382572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g300100 PIA1,PIG-L (1 of 1) 3.5.1.89 - N-acetylglucosaminylphosphatidylinositol deacetylase / N-acetylglucosaminylphosphatidylinositol de-N-acetylase; N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein 3'UTR
Cre06.g300139 (1 of 7) IPR010995 - DNA repair Rad51/transcription factor NusA, alpha-helical 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTGTGACAATTTGGCCTACTGTAGTGGCAGTGTCTCTCTATGCCTCAA
Internal bar code:CAACGTTTAGTAGTCGATGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1152
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTACGGGTGAGGACCATA
Suggested primer 2:TGTATGTGCGCCTGTGATGT