Insertion junction: CLIP2.060395_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060395
Chromosome:chromosome 16
Location:7961743
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691327 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGCTTCCGGGCGTACACCCCATGCTTGGCCCCATCCGCAACCCCCGT
Internal bar code:GGTAGCATGGGGGGACTAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3880
LEAP-Seq percent confirming:62.8571
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGACAGTTCCCGTAACCC
Suggested primer 2:CATTACGACATGCGGCAGTG