Insertion junction: CLIP2.060399_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060399
Chromosome:chromosome 6
Location:8422919
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308200 (1 of 2) K09531 - DnaJ homolog subfamily C member 11 (DNAJC11) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAAATGGTGAGCACTGCAGCTGGAATTGATGCTGCTGGTGGTGCCGGG
Internal bar code:TATAGGGGGATTAGCATTGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2299
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGCTGGCGATAGAGAGG
Suggested primer 2:CACTGCAACAAGTGGAAGCC