Insertion junction: CLIP2.060399_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060399
Chromosome:chromosome 6
Location:8422920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308200 (1 of 2) K09531 - DnaJ homolog subfamily C member 11 (DNAJC11) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTCAGTGGCGTCATCAGATCTAACAGCAATACCGTACTGGCGGTGGTT
Internal bar code:TATAGGGGGATTAGCATTGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2295
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGCAACAAGTGGAAGCC
Suggested primer 2:CACAGCTGGCGATAGAGAGG