Insertion junction: CLIP2.060400_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060400
Chromosome:chromosome 8
Location:2312557
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre08.g371000 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTCGGCGTCAGCGGTGGCGGGCCGCCGCCAGCAGTCGTCGGGCGCCTT
Internal bar code:ATTTTAATACTGATCTTTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:532
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGAGGAGGGTTGGATGGG
Suggested primer 2:GGTGAGGGGGTGATGTGATG