Insertion junction: CLIP2.060409_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060409
Chromosome:chromosome 9
Location:916532
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403150 PWR9 (1 of 14) PF04720 - PDDEXK-like family of unknown function (PDDEXK_6); PWR motif protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGGCTTGACTATCCCGCCCACTGTCTTTCATGGACGGCGGATGGGCC
Internal bar code:TAGGACTGAGGTTAGAGACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4458
LEAP-Seq percent confirming:47.2973
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGATTCTGGATACGACG
Suggested primer 2:AGTTTGCACTCGTTTGCGTC