Insertion junction: CLIP2.060415_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060415
Chromosome:chromosome 12
Location:8564535
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g548900 ROC23,ROC112 (1 of 2) PTHR23181//PTHR23181:SF7 - RHO GTPASE ACTIVATING PROTEIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGCAGACACCGTGTCATGTCTTTGCGTCCGATTGCTCGCCTCCGACA
Internal bar code:CGGGTGAGTGGGAAAATTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1380
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCTTCATGGATCGCTTG
Suggested primer 2:CGACTGCCAGCGACTGATAT