Insertion junction: CLIP2.060417_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060417
Chromosome:chromosome 12
Location:2260476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508550 PANB,PAN2,PANB1 (1 of 1) 2.1.2.11 - 3-methyl-2-oxobutanoate hydroxymethyltransferase / Ketopantoate hydroxymethyltransferase; Ketopantoate hydroxymethyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCTCTCAACCGCCTTCAACACCAACTGCAGCCGCATCAACTCTTCGT
Internal bar code:ACGTAGGCGTGAGCCCAACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1062
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCCCACCATGATACCGTA
Suggested primer 2:GGAAGCTGTTTGGTTGCCAG