Insertion junction: CLIP2.060418_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060418
Chromosome:chromosome 2
Location:4897922
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g109850 PIGC,SETH1,PIGC1,GPI2,GTR18 (1 of 1) K03859 - phosphatidylinositol glycan, class C (PIGC, GPI2); Phosphatidylinositol N-acetylglucosaminyltransferase, subunit C intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCGGTCCCGCACCCGCGCCCGCACAATCGCACCTGCACCTGAACAAC
Internal bar code:GCTTTGGCATAAGTTGGATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:553
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTGCAAACCTCTACCTG
Suggested primer 2:GTTGTTGGTAACGGGGCAAC