Insertion junction: CLIP2.060420_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060420
Chromosome:chromosome 6
Location:2865826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272350 5'UTR
Cre06.g272400 (1 of 1) PTHR11247:SF1 - DOLICHYLDIPHOSPHATASE 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTAAATGCAGTTATAGCATATGTATTGTAATTAACAGTACCTCGCATT
Internal bar code:ATATCAAATACTGGGCGATCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1155
LEAP-Seq percent confirming:45.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCGCCGAATCTGACATA
Suggested primer 2:GGGATTTGAGTCGATTGCGC