Insertion junction: CLIP2.060421_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060421
Chromosome:chromosome 1
Location:2809656
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g017300 PRPS21 Chloroplast ribosomal protein S21 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCCTGCAACCGTCCTTTCCTCCGCCCTACGCTGCTTCCAAGCCCACG
Internal bar code:GACGTCTTAGTTTACTTGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3639
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCTACATGCAGTAAACG
Suggested primer 2:ACGTGTGCAGGTTAGGACTG