Insertion junction: CLIP2.060423_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060423
Chromosome:chromosome 7
Location:777804
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g317908 (1 of 1) K04485 - DNA repair protein RadA/Sms (sms, radA) 3'UTR
Cre07.g317950 (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTGTGTTGTGTAACCGGGTGTGAAGCTGTCAGTGCCGTGGCCTAGCC
Internal bar code:AACCTAACTCTTAGTTTCAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2015
LEAP-Seq percent confirming:97.6744
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGGGCAAGTGAAGAGAAT
Suggested primer 2:TAGTTTGACGACTGCGCAGT