Insertion junction: CLIP2.060434_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060434
Chromosome:chromosome 6
Location:1249714
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258650 PGM6 Phosphoglycerate mutase-like protein; (1 of 4) PTHR23029:SF1 - FRUCTOSE-2,6-BISPHOSPHATASE TIGAR 3'UTR
Cre06.g258700 PYC1 (1 of 1) 6.4.1.1 - Pyruvate carboxylase / Pyruvic carboxylase; Pyruvate carboxylase 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTTGCGTTGCCAATCGACGCAGTACTAATGCACTATCGTGCAGCGCCA
Internal bar code:GACTAGGAGCTGATGCTAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:6458
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CGAATATTGCTGCAACCCGG
Suggested primer 2:ACATTGTTACGGATGGCGGT