Insertion junction: CLIP2.060434_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060434
Chromosome:chromosome 6
Location:1249728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258650 PGM6 Phosphoglycerate mutase-like protein; (1 of 4) PTHR23029:SF1 - FRUCTOSE-2,6-BISPHOSPHATASE TIGAR 3'UTR
Cre06.g258700 PYC1 (1 of 1) 6.4.1.1 - Pyruvate carboxylase / Pyruvic carboxylase; Pyruvate carboxylase 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGGTGCAGCAATGTGATGCATGTTTTTGGGGTGATGGGCGCCTTGTC
Internal bar code:AGACTCTCTTCCCGCGTGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1726
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:ACATTGTTACGGATGGCGGT
Suggested primer 2:CGAATATTGCTGCAACCCGG