Insertion junction: CLIP2.060436_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060436
Chromosome:chromosome 1
Location:1038246
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g006150 EFG9,PRFC1, PRFC1,PRF3 (1 of 1) PTHR23115//PTHR23115:SF69 - TRANSLATION FACTOR // PEPTIDE CHAIN RELEASE FACTOR 3; Putative chloroplast translation peptide-chain release factor 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTTGCTCGCCCAGCCCCAGCCGCCCACTCACCCGACACCACGCGCACG
Internal bar code:ATAATCCCAGGCTACATCACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:105
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AATGGATTGGGTGGCGGAAT
Suggested primer 2:AGGCAGGGAAGGAGAAATGC