Insertion junction: CLIP2.060442_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060442
Chromosome:chromosome 15
Location:1521582
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre15.g801738 (1 of 1) PTHR14387:SF0 - PROTEIN Y92H12A.5, ISOFORM B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATACCGTTAAATGGTGGTTGGGTTGCGGTTAGCGGTTAGCGGTTGGCG
Internal bar code:TGCGAGTGGGAGGTTTGCCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:141
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTGATCCTCTCCCCCTC
Suggested primer 2:CCCCACCCCATACAGGTTTC