Insertion junction: CLIP2.060456_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060456
Chromosome:chromosome 4
Location:281855
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g217750 (1 of 1) PTHR16017//PTHR16017:SF0 - GASTRULATION DEFECTIVE PROTEIN 1-RELATED // WD REPEAT-CONTAINING PROTEIN 70 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAGGGGAGGGGGGCGGCGGCACGCCGCGGTGGGGGTGCGAGGCAGTG
Internal bar code:TCTCATTATTTAGATTACACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:203
LEAP-Seq percent confirming:31.8182
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGTGCTGTCGGGTGTAT
Suggested primer 2:CGTTGTGGAGTTTGTGCCTG