Insertion junction: CLIP2.060457_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060457
Chromosome:chromosome 10
Location:916287
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g424150 TF2A4 (1 of 1) K03123 - transcription initiation factor TFIIA small subunit (TFIIA2, GTF2A2, TOA2); Transcription initiation factor IIA, gamma subunit 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAAATAAAAATTGACAAGGTCAGGGGTGTCGACCAGAGCTAGAGAACA
Internal bar code:CTGCTATTAGATTAGGAACCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3323
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGACATGGACTGTGACGG
Suggested primer 2:GCTGTTTGATAGAGCTGCGC