Insertion junction: CLIP2.060457_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060457
Chromosome:chromosome 10
Location:916293
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g424150 TF2A4 (1 of 1) K03123 - transcription initiation factor TFIIA small subunit (TFIIA2, GTF2A2, TOA2); Transcription initiation factor IIA, gamma subunit 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCTACAAAATGCCTTCACCCAACAGTCATGCACGGCGTGTCTAGCCCC
Internal bar code:GACGTGCGGAAGATTATTAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1702
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTTTGATAGAGCTGCGC
Suggested primer 2:TTGGACATGGACTGTGACGG