Insertion junction: CLIP2.060464_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060464
Chromosome:chromosome 12
Location:5543370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g530700 (1 of 1) K03126 - transcription initiation factor TFIID subunit 12 (TAF12) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAAGGCCTGAAACACTGGCGCGCTTGTCTTTGATTCAGAGCTCTTGCA
Internal bar code:AACAGTATAGGCGGGTCCGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3637
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCTGGTATTGCGCCATG
Suggested primer 2:GCTACCCTAGACGTGGCATC