Insertion junction: CLIP2.060473_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060473
Chromosome:chromosome 4
Location:3802670
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g800498 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGAAGGTATATCATTTGAAATTGAAGGTGGCAAGGAACGCTTGCTTGC
Internal bar code:TGACGCGAGGGATAATCCCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:207
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGTGGGTTTGTTAGGTCG
Suggested primer 2:TGGGTCTTGAGCTCCGGATA