Insertion junction: CLIP2.060473_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060473
Chromosome:chromosome 17
Location:1055236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g703550 (1 of 5) IPR001025 - Bromo adjacent homology (BAH) domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATACAAATGACAAAATCAAATGAAGGGGACAACAAGCCAAGCGCGGAAG
Internal bar code:TAAGTCATGGTTAAAATGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1430
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTCAGCTGCAGTACGTGG
Suggested primer 2:CGCTGTAACACGCACATACG