Insertion junction: CLIP2.060473_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060473
Chromosome:mitogenome
Location:4445
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreMt.g802339 nad5,ChrepMp03,801492 NADH dehydrogenase subunit 5; (1 of 1) K03883 - NADH-ubiquinone oxidoreductase chain 5 (ND5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAAATGGCTTTTTGAGCACTTTTAACGGCGGATAGACGATGACTCCA
Internal bar code:GTGCGGATCGGTTAGGATGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:678
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCACCGAATAGGGCTGG
Suggested primer 2:AGCACTGTGAGCACTACCAC