Insertion junction: CLIP2.060478_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060478
Chromosome:chromosome 10
Location:3447364
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801144 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTATCGATAGACTGGTCGTGCTGTATTGCACTAGGCTGGCCATTGGCGG
Internal bar code:GGTGGCGTGCAGTACTGCATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1718
LEAP-Seq percent confirming:86.8421
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTGCAAGGTTGGTTGGGT
Suggested primer 2:ACCCATACTCCCTCCTCACC