Insertion junction: CLIP2.060486_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060486
Chromosome:chromosome 15
Location:1255821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801725 NCL64 Nuclear Control of chloroplast-Like 64; (1 of 39) PF08373 - RAP domain (RAP) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTACAGTTTATAGTATCAGATAGCACTTGAATAGCGCGAGGAACTGTG
Internal bar code:CTGGTCGCGGGATGAGCGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:591
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCCTAGCCTAACCTCTCA
Suggested primer 2:GCTCCCCTGTTAATGCTGGT